03. Amino Acids & Peptides
24 3 月, 2021 / By 王介立醫師
BIOMEDICAL IMPORTANCE
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L–α-Amino acids
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腎臟每天超過濾出50克的游離胺基酸,但大部份都回收
PROPERTIES OF AMINO ACIDS
The Genetic Code Specifies 20 L-α-Amino Acids
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大自然有超過300種胺基酸,絕大多數蛋白質由20種胺基酸組成
Selenocysteine, the 21st Protein L-α-Amino Acid
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人類有兩打的selenoproteins,包含iodothyronine deiodinases(把T4轉成T3)
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UGA為stop codon,但若伴隨著selenocysteine insertion element (stem-loop structure),則此UAG會被tRNASec辨視,進而轉譯selenocysteine上去
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Serine的氧變硫就是cysteine、硫變硒就是selenocysteine
Stereochemistry of the Protein Amino Acids
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除了glycine外,胺基酸的α-carbon為chiral;雖然胺基酸有左旋及右旋,但全部都有L-glyceraldehyde的結構,因此才會稱為L-α-amino acids
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R/S來自右手命名法則
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D/L來自L-glyceraldehyde
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d/l or (+)/(-)來自光學性質
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大部份的胺基酸是(R),但L-cysteine是(S)
Posttranslational Modifications Confer Additional Properties
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某些prokaryotes會使用pyrrolysine
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植物可使用azetidine-2-carboxylic acid,此為proline analogue
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在collagen,proline會變成4-hydroxyproline,lysine會變成5-hydroxylysine
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凝血因子的glutamyl residues經carboxylation變γ-carboxyglutamyl residues
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Histones的lysine可經acetylation及methylation;arginine可經deamination
Extraterrestrial Amino Acids Have Been Detected in Meteorites
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α-amino acids: Ala, Asp, Glu, Gly, Ile, Leu, Phe, Ser, Thr, Tyr, Val, N-methylglycine (sarcosine), β-alanine
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D-及L-isomers混合之3-5碳胺基酸
L-α-Amino Acids Serve Additional Metabolic Roles
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Tyrosine為甲狀腺素之原料
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Tyrosine及phenylalanine會被代謝成epinephrine, norepinephrine及dihydroxyphenylalanine (DOPA)
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Glutamine為neurotransmitter,也是γ-aminobutyric acid (GABA)之原料
Certain Plant ʟ-α-Amino Acids Can Adversely Impact Human Health
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Lathyrus(山黧豆)造成neurolathyrism,來自L-homoarginine及β-N-oxalyl-L-α,β-diaminopropionic acid (β-ODPA)
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γ-glutamyl-β-aminopropionitrile (BAPN)為osteolathyrogen,來自sweet pea種子
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α,γ-diaminobutyric acid為ornithine相似物,會抑制hepatic urea cycle的ornithine transcarbamylase,造成ammonia中毒
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Cycad(蘇鐵)種子含L-β-methylaminoalanine,會讓amyotrophic lateral sclerosis-Parkinson demantia complex的風險上升。
D-Amino Acids
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人腦組織天然存在D-serine及D-aspartate
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革蘭氏陽性菌的細胞壁有D-amino acids
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Bacillus subtilis會分泌D-methionine, D-tyrosine, D-leucine, D-tryptophan以引發生物膜的分解
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Vibrio cholera的peptidoglycin含D-leucine及D-methionine
PROPERTIES OF THE FUNCTIONAL GROUPS OF AMINO ACIDS
Amino Acids May Have Positive, Negative, or Zero Net Charge
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在生理環境,carboxyl group幾乎以R-COO⁻之型式存在,amino group幾乎以R-NH₃⁺之型式存在
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